The tailless ortholog nhr-67 functions in the development of the C. elegans ventral uterus
Eliana Verghesea, John Schockena, Sandrine Jacobb, Angela M. Wimera, Rebecca Roycea, Jessica E. Nesmitha, G. Michael Baera, Sheila Clevera, Elizabeth McCaina, Bernard Lakowskib, Bruce Wightmana, ,
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doi:10.1016/j.ydbio.2011.06.007
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Abstract
The development of the C. elegans uterus provides a model for understanding the regulatory pathways that control organogenesis. In C. elegans, the ventral uterus develops through coordinated signaling between the uterine anchor cell (AC) and a ventral uterine (VU) cell. The nhr-67 gene encodes the nematode ortholog of the tailless nuclear receptor gene. Fly and vertebrate tailless genes function in neuronal and ectodermal developmental pathways. We show that nhr-67 functions in multiple steps in the development of the C. elegans uterus. First, it functions in the differentiation of the AC. Second, it functions in reciprocal signaling between the AC and an equipotent VU cell. Third, it is required for a later signaling event between the AC and VU descendants. nhr-67 is required for the expression of both the lag-2/Delta signal in the AC and the lin-12/Notch receptor in all three VU cells and their descendants, suggesting that nhr-67 may be a key regulator of Notch-signaling components. We discuss the implications of these findings for proposed developmental regulatory pathways that include the helix–loop–helix regulator hlh-2/daughterless and transcription factor egl-43/Evi1 in the differentiation of ventral uterine cell types.
Research highlights
► The nhr-67 tailless gene functions in multiple steps of ventral uterus development. ► nhr-67 is required for the Notch-mediated AC–VU signal. ► nhr-67 is a key regulator of lin-12/Notch and the lag-2/Delta. ► nhr-67 functions in differentiation of the anchor cell.
Keywords
Notch; Organogenesis; Nuclear receptors
Introduction
The NR2E1/NR2E2 nuclear receptor transcription factors are conserved among animal phyla where they play major roles in regulating development. The Drosophila gene tailless (tll) functions in embryonic body patterning and the development of neurons ( Daniel et al., 1999, Jürgens et al., 1984 and Pignoni et al., 1990). The vertebrate ortholog of tailless (Tlx) functions in the development of limbic and rhinencephalic brain regions in the mouse and is a key regulator of embryonic and adult neural stem cell development ( Monaghan et al., 1997, Shi et al., 2004 and Yu et al., 1994). The C. elegans genome sequencing project identified nhr-67, which encodes the nematode ortholog of tll ( DeMeo et al., 2008 and Gissendanner et al., 2004). Like most nuclear receptors, nhr-67 encodes a protein with a well-conserved DNA-binding domain and a more weakly conserved ligand-binding domain, although ligands have not been identified for any members of the NR2E1/NR2E2 subclass. RNA-mediated interference (RNAi) experiments revealed that nhr-67(RNAi) animals were slow-growing and displayed cuticle-shedding defects, egg-laying defects (Egl phenotype), and a protruding vulva (Pvl phenotype), suggesting that nhr-67 plays multiple roles in development ( Gissendanner et al., 2004). Fernandes and Sternberg (2007) demonstrated that nhr-67 plays a role in cell fusion events during vulval morphogenesis, Kato and Sternberg (2009) showed that nhr-67 functions in the migration of the male linker cell, and Sarin et al. (2009) identified a role for nhr-67 in neuronal differentiation. In this study, we describe the role of nhr-67 in regulating development of cells that comprise the ventral C. elegans hermaphrodite uterus.
The development of the C. elegans uterus has served as a model for understanding the mechanisms of organogenesis. A series of cell–cell signaling events utilize the Notch pathway to create the adult hermaphrodite uterus, which consists of sixty cells that contain a lumen and connect to the dorsal side of the vulva ( Fig. 1; Newman and Sternberg, 1996 and Newman et al., 1996). The anchor cell (AC) of the ventral uterus plays a pivotal role in coordinating the development of the uterus. The AC is generated from one of two equipotent cells in the immature L2 somatic gonad. The cell that does not become the AC becomes a VU (ventral uterine) cell. The selection of which cell executes each fate depends on birth order and reciprocal signaling between a delta-like signal, LAG-2, and a Notch-like receptor, LIN-12 ( Greenwald et al., 1983, Karp and Greenwald, 2003 and Kimble and Simpson, 1997). The AC expresses the LAG-2 signal and down-regulates expression of LIN-12 receptor, while the VU cell down-regulates expression of LAG-2. When function of either lin-12 or lag-2 is compromised, the VU cell executes an AC fate, resulting in the formation of 2 AC's. Two other somatic gonad cells also serve as VU cells, for a total complement of three VU and one AC in late L2 wild-type animals. While the AC is terminally differentiated in the L2, the three VU cells divide multiple times during the L3 and L4 stages to produce 36 cells that comprise the ventral uterine tissue and part of the uterine–spermathecal junction ( Kimble and Hirsh, 1979).
Summary of ventral uterine development. Larval stages are designated in left ...
Fig. 1.
Summary of ventral uterine development. Larval stages are designated in left column. VU cells are shown as stippled nuclei. The AC is shown in black until it fuses with UTSE. The π cells and their descendants are shown as white nuclei. Cell–cell communication events are designated by solid gray arrows, cellular migrations by broken arrows. The early L3 through late L4 views show the π cells and their descendant cells on one side of the animal only; the total number of π lineage cells is double that shown.
Figure options
During the L3 stage, the AC signals using LAG-2 to six adjacent VU descendants via the LIN-12 receptor to execute a single dorsal–ventral division, which is termed the π fate (Fig. 1; Newman et al., 1995, Newman et al., 1996 and Newman et al., 2000). The twelve π cell descendants differentiate into four UV1 cells, which will connect directly to the dorsal side of the vulva, and eight cells that fuse to create a large, thin UTSE syncytial cell that forms the ventral surface of the uterus. The six additional VU descendants that do not receive the LAG-2 AC signal execute a default anterior–posterior division and then divide a second time (ρ fate). Following its final role in orchestrating the development of the uterus, the AC “retires” by fusing with the UTSE syncytium during the L4 stage (Newman et al., 1996).
The similarity among the phenotypes caused by nhr-67 mutations and the phenotypes of mutations in other genes that function in uterine development, combined with a dynamic pattern of nhr-67 expression in AC and VU cells, suggested that nhr-67 might function in a lin-12/Notch pathway to regulate uterine development. To test this possibility, we identified and studied mutations in the nhr-67 coding region and promoter, and explored the regulation of nhr-67 in ventral uterine cells. Our data support a model in which nhr-67 functions upstream of the lin-12/Notch receptor in the VU lineages, upstream of the lag-2/Delta signal in the AC, and in a pathway that includes hlh-2/daughterless and egl-43/Evi1 transcription factors to control ventral uterine development at multiple steps.
Materials and methods
Identification and characterization of nhr-67 promoter mutations
During screens for spontaneous mutations with visible phenotypes in a dog-1(gk10)I background, we isolated a mutation with a partially penetrant Egl and Pvl phenotype superficially similar to the weak sel-12(ar131) presenilin mutation. Genetic mapping experiments placed pf2 on LG IV in an interval between SNP_R13[1] and pkP4085 near dbP7 (data not shown). dog-1 encodes a DNA helicase orthologous to the human BACH1/BRIP1/FANCJ gene implicated in Fanconi anemia and certain cancers ( Cheung et al., 2002 and Youds et al., 2008). Elimination of dog-1 function leads to a high frequency of deletions starting at long G-rich sequences, especially poly-G stretches, that can form multiple G-quadruplexes when the DNA is single stranded ( Cheung et al., 2002, Kruisselbrink et al., 2008 and Zhao et al., 2008). We looked for candidate genes in the region that could explain the Egl phenotype and which contained a G-rich sequence in, or near the gene. For each candidate gene we designed primers flanking the G-rich sequences and tested for the presence of deletions in the pf2 strain ( Table S2). No deletions were identified for the Notch ligands dsl-5 and dsl-6, nor for T01G1.3, but a small deletion was detected in the promoter region of nhr-67 by genomic amplification. A stronger Egl mutation with a larger deletion of the nhr-67 promoter, pf159, was recovered in the same screen.
The pf88 mutation was recovered as a spontaneous mutation arising in the background of a dog-1(gk10) I; sel-12(ty11) spr-3(pf83) X strain. The sel-12(ty11) mutation causes a strong Egl defect and a moderate penetrance Pvl defect ( Cinar et al., 2001 and Gontijo et al., 2009), similar to a weak lin-12(lf) allele. The phenotypic effects of sel-12 mutations are completely suppressed by loss of spr-3 activity which leads to the de-repression of the transcription of the hop-1 presenilin gene ( Lakowski et al., 2003). The pf88 mutation causes a nearly 100% penetrant Egl and Pvl phenotype in the sel-12 spr-3 background, indicating that pf88 is epistatic to spr-3 (data not shown). The pf2, pf88 and pf159 mutations were removed from the presence of all other known mutations in the isolation strains by outcrosses and the presence of the nhr-67 deletion and absence of dog-1(gk10) was confirmed by amplification from genomic DNA using specific oligonucleotides ( Table S2) before phenotypic characteriza
The tailless ortholog nhr-67 functions in the development of the C. elegans ventral uterusEliana Verghesea, John Schockena, Sandrine Jacobb, Angela M. Wimera, Rebecca Roycea, Jessica E. Nesmitha, G. Michael Baera, Sheila Clevera, Elizabeth McCaina, Bernard Lakowskib, Bruce Wightmana, , Under an Elsevier user license Show moredoi:10.1016/j.ydbio.2011.06.007Get rights and content Open ArchiveAbstractThe development of the C. elegans uterus provides a model for understanding the regulatory pathways that control organogenesis. In C. elegans, the ventral uterus develops through coordinated signaling between the uterine anchor cell (AC) and a ventral uterine (VU) cell. The nhr-67 gene encodes the nematode ortholog of the tailless nuclear receptor gene. Fly and vertebrate tailless genes function in neuronal and ectodermal developmental pathways. We show that nhr-67 functions in multiple steps in the development of the C. elegans uterus. First, it functions in the differentiation of the AC. Second, it functions in reciprocal signaling between the AC and an equipotent VU cell. Third, it is required for a later signaling event between the AC and VU descendants. nhr-67 is required for the expression of both the lag-2/Delta signal in the AC and the lin-12/Notch receptor in all three VU cells and their descendants, suggesting that nhr-67 may be a key regulator of Notch-signaling components. We discuss the implications of these findings for proposed developmental regulatory pathways that include the helix–loop–helix regulator hlh-2/daughterless and transcription factor egl-43/Evi1 in the differentiation of ventral uterine cell types.Research highlights► The nhr-67 tailless gene functions in multiple steps of ventral uterus development. ► nhr-67 is required for the Notch-mediated AC–VU signal. ► nhr-67 is a key regulator of lin-12/Notch and the lag-2/Delta. ► nhr-67 functions in differentiation of the anchor cell.KeywordsNotch; Organogenesis; Nuclear receptorsIntroductionThe NR2E1/NR2E2 nuclear receptor transcription factors are conserved among animal phyla where they play major roles in regulating development. The Drosophila gene tailless (tll) functions in embryonic body patterning and the development of neurons ( Daniel et al., 1999, Jürgens et al., 1984 and Pignoni et al., 1990). The vertebrate ortholog of tailless (Tlx) functions in the development of limbic and rhinencephalic brain regions in the mouse and is a key regulator of embryonic and adult neural stem cell development ( Monaghan et al., 1997, Shi et al., 2004 and Yu et al., 1994). The C. elegans genome sequencing project identified nhr-67, which encodes the nematode ortholog of tll ( DeMeo et al., 2008 and Gissendanner et al., 2004). Like most nuclear receptors, nhr-67 encodes a protein with a well-conserved DNA-binding domain and a more weakly conserved ligand-binding domain, although ligands have not been identified for any members of the NR2E1/NR2E2 subclass. RNA-mediated interference (RNAi) experiments revealed that nhr-67(RNAi) animals were slow-growing and displayed cuticle-shedding defects, egg-laying defects (Egl phenotype), and a protruding vulva (Pvl phenotype), suggesting that nhr-67 plays multiple roles in development ( Gissendanner et al., 2004). Fernandes and Sternberg (2007) demonstrated that nhr-67 plays a role in cell fusion events during vulval morphogenesis, Kato and Sternberg (2009) showed that nhr-67 functions in the migration of the male linker cell, and Sarin et al. (2009) identified a role for nhr-67 in neuronal differentiation. In this study, we describe the role of nhr-67 in regulating development of cells that comprise the ventral C. elegans hermaphrodite uterus.The development of the C. elegans uterus has served as a model for understanding the mechanisms of organogenesis. A series of cell–cell signaling events utilize the Notch pathway to create the adult hermaphrodite uterus, which consists of sixty cells that contain a lumen and connect to the dorsal side of the vulva ( Fig. 1; Newman and Sternberg, 1996 and Newman et al., 1996). The anchor cell (AC) of the ventral uterus plays a pivotal role in coordinating the development of the uterus. The AC is generated from one of two equipotent cells in the immature L2 somatic gonad. The cell that does not become the AC becomes a VU (ventral uterine) cell. The selection of which cell executes each fate depends on birth order and reciprocal signaling between a delta-like signal, LAG-2, and a Notch-like receptor, LIN-12 ( Greenwald et al., 1983, Karp and Greenwald, 2003 and Kimble and Simpson, 1997). The AC expresses the LAG-2 signal and down-regulates expression of LIN-12 receptor, while the VU cell down-regulates expression of LAG-2. When function of either lin-12 or lag-2 is compromised, the VU cell executes an AC fate, resulting in the formation of 2 AC's. Two other somatic gonad cells also serve as VU cells, for a total complement of three VU and one AC in late L2 wild-type animals. While the AC is terminally differentiated in the L2, the three VU cells divide multiple times during the L3 and L4 stages to produce 36 cells that comprise the ventral uterine tissue and part of the uterine–spermathecal junction ( Kimble and Hirsh, 1979).Summary of ventral uterine development. Larval stages are designated in left ...Fig. 1. Summary of ventral uterine development. Larval stages are designated in left column. VU cells are shown as stippled nuclei. The AC is shown in black until it fuses with UTSE. The π cells and their descendants are shown as white nuclei. Cell–cell communication events are designated by solid gray arrows, cellular migrations by broken arrows. The early L3 through late L4 views show the π cells and their descendant cells on one side of the animal only; the total number of π lineage cells is double that shown.Figure optionsDuring the L3 stage, the AC signals using LAG-2 to six adjacent VU descendants via the LIN-12 receptor to execute a single dorsal–ventral division, which is termed the π fate (Fig. 1; Newman et al., 1995, Newman et al., 1996 and Newman et al., 2000). The twelve π cell descendants differentiate into four UV1 cells, which will connect directly to the dorsal side of the vulva, and eight cells that fuse to create a large, thin UTSE syncytial cell that forms the ventral surface of the uterus. The six additional VU descendants that do not receive the LAG-2 AC signal execute a default anterior–posterior division and then divide a second time (ρ fate). Following its final role in orchestrating the development of the uterus, the AC “retires” by fusing with the UTSE syncytium during the L4 stage (Newman et al., 1996).The similarity among the phenotypes caused by nhr-67 mutations and the phenotypes of mutations in other genes that function in uterine development, combined with a dynamic pattern of nhr-67 expression in AC and VU cells, suggested that nhr-67 might function in a lin-12/Notch pathway to regulate uterine development. To test this possibility, we identified and studied mutations in the nhr-67 coding region and promoter, and explored the regulation of nhr-67 in ventral uterine cells. Our data support a model in which nhr-67 functions upstream of the lin-12/Notch receptor in the VU lineages, upstream of the lag-2/Delta signal in the AC, and in a pathway that includes hlh-2/daughterless and egl-43/Evi1 transcription factors to control ventral uterine development at multiple steps.Materials and methodsIdentification and characterization of nhr-67 promoter mutationsDuring screens for spontaneous mutations with visible phenotypes in a dog-1(gk10)I background, we isolated a mutation with a partially penetrant Egl and Pvl phenotype superficially similar to the weak sel-12(ar131) presenilin mutation. Genetic mapping experiments placed pf2 on LG IV in an interval between SNP_R13[1] and pkP4085 near dbP7 (data not shown). dog-1 encodes a DNA helicase orthologous to the human BACH1/BRIP1/FANCJ gene implicated in Fanconi anemia and certain cancers ( Cheung et al., 2002 and Youds et al., 2008). Elimination of dog-1 function leads to a high frequency of deletions starting at long G-rich sequences, especially poly-G stretches, that can form multiple G-quadruplexes when the DNA is single stranded ( Cheung et al., 2002, Kruisselbrink et al., 2008 and Zhao et al., 2008). We looked for candidate genes in the region that could explain the Egl phenotype and which contained a G-rich sequence in, or near the gene. For each candidate gene we designed primers flanking the G-rich sequences and tested for the presence of deletions in the pf2 strain ( Table S2). No deletions were identified for the Notch ligands dsl-5 and dsl-6, nor for T01G1.3, but a small deletion was detected in the promoter region of nhr-67 by genomic amplification. A stronger Egl mutation with a larger deletion of the nhr-67 promoter, pf159, was recovered in the same screen.The pf88 mutation was recovered as a spontaneous mutation arising in the background of a dog-1(gk10) I; sel-12(ty11) spr-3(pf83) X strain. The sel-12(ty11) mutation causes a strong Egl defect and a moderate penetrance Pvl defect ( Cinar et al., 2001 and Gontijo et al., 2009), similar to a weak lin-12(lf) allele. The phenotypic effects of sel-12 mutations are completely suppressed by loss of spr-3 activity which leads to the de-repression of the transcription of the hop-1 presenilin gene ( Lakowski et al., 2003). The pf88 mutation causes a nearly 100% penetrant Egl and Pvl phenotype in the sel-12 spr-3 background, indicating that pf88 is epistatic to spr-3 (data not shown). The pf2, pf88 and pf159 mutations were removed from the presence of all other known mutations in the isolation strains by outcrosses and the presence of the nhr-67 deletion and absence of dog-1(gk10) was confirmed by amplification from genomic DNA using specific oligonucleotides ( Table S2) before phenotypic characteriza
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